#include <iostream>
#include <set>
#include "Nucleotide.h"
#include "AminoAcid.h"
Namespaces | |
namespace | seq |
Classes | |
class | seq::Mutation< Char > |
A mutation in a sequence of type Char. More... | |
Typedefs | |
typedef Mutation< Nucleotide > | seq::NTMutation |
A typedef for nucleotide mutations. | |
typedef Mutation< AminoAcid > | seq::AAMutation |
A typedef for amino acid mutations. | |
Functions | |
std::set< AAMutation > | seq::readMutations (std::istream &mutationFile, std::string prefix) throw (ParseException) |