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AASequence.h File Reference

#include <vector>
#include <string>
#include <iostream>
#include "NTSequence.h"
#include "AminoAcid.h"

Namespaces

namespace  seq

Classes

class  seq::AASequence
 An amino acid sequence. More...

Functions

std::istream & seq::operator>> (std::istream &i, AASequence &sequence) throw (ParseException)
 Read an amino acid sequence in FASTA format from the given stream.
std::ostream & seq::operator<< (std::ostream &o, const AASequence &sequence)
 Write an amino acid sequence to the given stream in FASTA format.

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