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seq::NucleotideSubstitutionModel Member List

This is the complete list of members for seq::NucleotideSubstitutionModel, including all inherited members.

getMu(Nucleotide fromNT, Nucleotide toNT) const seq::NucleotideSubstitutionModel
NucleotideSubstitutionModel(double piA, double piC, double piG, double piT, double rAC, double rAG, double rAT, double rCG, double rCT, double rGT, double errorRate)seq::NucleotideSubstitutionModel
NucleotideSubstitutionModel(double rAC, double rAG, double rAT, double rCA, double rCG, double rCT, double rGA, double rGC, double rGT, double rTA, double rTC, double rTG, double piA, double piC, double piG, double piT, double errorRate)seq::NucleotideSubstitutionModel
print(std::ostream &s) const seq::NucleotideSubstitutionModel


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